CDS

Accession Number TCMCG066C03855
gbkey CDS
Protein Id XP_034575560.1
Location join(38642203..38642433,38642525..38642815,38643526..38643862,38644450..38644787,38645059..38645306,38645608..38646193,38646277..38646390,38646472..38646726)
Gene LOC117839355
GeneID 117839355
Organism Setaria viridis

Protein

Length 799aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034719669.1
Definition THO complex subunit 5A-like isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Fms-interacting protein
KEGG_TC -
KEGG_Module M00405        [VIEW IN KEGG]
M00406        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13174        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000346        [VIEW IN EMBL-EBI]
GO:0000347        [VIEW IN EMBL-EBI]
GO:0000445        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032784        [VIEW IN EMBL-EBI]
GO:0032786        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGGCGCCGACGGCGGAAGCCATGGACGTCGAGGCACCGGCTAAGCCGCCGTCCACCGCCTCGGCCACCAAGTCCCGCTCCCCGCACGACCTCCTGGCCGAGACCCGCGCTTCCATCGAGAAGGTCGCCGCCCGGATGCTCGCCATCAAGAGGGACGGCGTCCCCAAGTCAGAGCTCCGGGAGCTCGTCACCCAGATGTCGCTCCTCCTCGTCACGCTCCGCCAAGTTAACAGGGAGATACTGATGGAGGAGGACAAGGTGAAGGCGGAGACGGAGGCCGCGAAGGCGCCGGTGGACTCCACGACGCTGCAGCTGCACAACCTGTTGTACGAGAAGAACCACTACGTGAAGGCCATTAGGACGTGCCTAGACTTCCAGACGAAGTACCCGGGGATAGAGCTCGTGCCAGAGGAGGAGTTCCAGCGTGCGGCACCGGCGGACATTCGCGACAAGACACTCGCTGCTGACGCGTCACATGACCTCATGCTCAAGCGCCTCAACTTTGAGCTCGTCCAGCGGAAAGAGTTGTGCAAGCTACATGAGAAATTGGCACTCCAAAGGAGCAGCTTGCTGGAGACAATTGCTAATCAGAAAAAGTTTCTTTCAAGCCTTCCATCACATTTGAAATCACTGAAGAAAGCATCATTGCCAGTGCAGCAGCAGCTAGGCATGCAACATACCAAGAAACTAAAGCAGCACCATGCTGCTGAGTTGCTTCCAACCCCACTTTATATAGCATACACTCAGTTGTTAGGGCAGAAAGAAGCATTTGGAGAGAATATTGAAGTTGAGATCATGGGAAGCACAAAGGATGCCCAGATATTTGCTCAACAGCAAGCCAAGAAGGAAAATGCAGGCACCTTATCAAATGGTGACAACAACAGAATGGACGATGATGTAATTGATGATGATGAAGTTGCTCAGAGAAGAAGATCAAGATCCAAAAAAAATGTCATGAAGGAAGCTAATAATCCTGCAGTGGCATATCAACTTCATCCACTCAAAATTATTGTCCATGTATATGATACTGAAGATTCTGGTACCAAACGTCGTAAACTCATCACCTTGCGGTTTGAATACTTGGCAAAGCTGAATGTTGTTTGTGTTGGAATTGAAGAGTCTGAGGGCCTGGATAATAATGTCTTGTGCAACCTATTTCCAGATGACACTGGTTTAGAGCTGCCTCACCAGATGGCTAAGATATATGCTGGGGAGCCTCCAAACTTCACTGACAAGAATTCAAGACCATACAAGTGGGCACAGCATCTAGCTGGTATCGATTTTTTGCCAGAAGTCCCTCCATCTGCTGGGGATGATTCTATCAGAGCATTGAGCAGCTCTGATTTGTCATCTGGGCTTGCTCTATACCGTCAGCAGAACCGTGCACAGACTATTTTGCAGAGAATCCGCTCGCGGAAAGTTACACAGATGGCTCTTATGTGGCAACTTGATTATTTGACAAAGCTGAAGTGGCCTCGAATAGACCATAAAAATACACCATGGGCATCGCGCACCCCATTGTGTAGTTTGCATAGTTGGACAATGACAGGTTCTTTTCCTGAGCCATTGTCTCGTTCTAGTTTGATGGTAAGTGGGGCTGCAAGCAGTGTTGACAGTGATCTAGAGAGAAGATCTGTGACAAACTGGGAAGAAACTGAGAGTATCAGGGAGGATGGGGAGCTCCCGGTTGTTGTTCATGCTGAGAACGAGCCAAGAGGTTCTGCAATTTTGCCCTCTGAGATGTCACCTGAGGTTCGGAGCCATTCTAGAGGCTTATCCCTGATATCAAAGAGTGCAACACCATCTAAGCTAAGCATCTCACACAGTTTTGGTAGAAATGAGGATGATCTAGATCTCTTGATGTATAGTGACAGTGAGTTGGAGGACCCGCCCTTCATTCATGAAGAAACTGAAAAAGGTAACCTAGTTATAGATAACTCCTGGGAGGATTATGCTTCCAAGGAGTTCACCATGGTCTTGAGTAAAGCTATGAAGAATGGTCCAAAAGTTATGCTGGAAGCTAAGGTTAAGATAAGCATAGAATATCCTCTTAGGCCTCCCCTTTTCGAATTACGTTTGCTCTCAGAAAAGTCTGAAACTTTAAAGTGGCACAATGACCTCCGTGCAATGGAAACTGAGGTAAATCTTCACATCCTTAGAAGCCTACCTTCATCTTGTGAGGATTATATATTGACTCACCAAGTTATGTGCCTCGCTATGCTGTTTGATATGCATTTTGATGAGGATTACGAGAAAAGAAAAGTTACTTCAGTGATTGATGTTGGCCTCTGCAAACCTGTTAGTGGAACCATGCTTACTAGATCAGTTAGGGGAAGAGACCGTAGGCAGACTATTTATTGGAGAGGTGCTGATTGCTCTTCAAGTTATTTGTAG
Protein:  
MAAAPTAEAMDVEAPAKPPSTASATKSRSPHDLLAETRASIEKVAARMLAIKRDGVPKSELRELVTQMSLLLVTLRQVNREILMEEDKVKAETEAAKAPVDSTTLQLHNLLYEKNHYVKAIRTCLDFQTKYPGIELVPEEEFQRAAPADIRDKTLAADASHDLMLKRLNFELVQRKELCKLHEKLALQRSSLLETIANQKKFLSSLPSHLKSLKKASLPVQQQLGMQHTKKLKQHHAAELLPTPLYIAYTQLLGQKEAFGENIEVEIMGSTKDAQIFAQQQAKKENAGTLSNGDNNRMDDDVIDDDEVAQRRRSRSKKNVMKEANNPAVAYQLHPLKIIVHVYDTEDSGTKRRKLITLRFEYLAKLNVVCVGIEESEGLDNNVLCNLFPDDTGLELPHQMAKIYAGEPPNFTDKNSRPYKWAQHLAGIDFLPEVPPSAGDDSIRALSSSDLSSGLALYRQQNRAQTILQRIRSRKVTQMALMWQLDYLTKLKWPRIDHKNTPWASRTPLCSLHSWTMTGSFPEPLSRSSLMVSGAASSVDSDLERRSVTNWEETESIREDGELPVVVHAENEPRGSAILPSEMSPEVRSHSRGLSLISKSATPSKLSISHSFGRNEDDLDLLMYSDSELEDPPFIHEETEKGNLVIDNSWEDYASKEFTMVLSKAMKNGPKVMLEAKVKISIEYPLRPPLFELRLLSEKSETLKWHNDLRAMETEVNLHILRSLPSSCEDYILTHQVMCLAMLFDMHFDEDYEKRKVTSVIDVGLCKPVSGTMLTRSVRGRDRRQTIYWRGADCSSSYL